STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEV25263.1COG3914 Predicted O-linked N-acetylglucosamine transferase, SPINDLY family. (665 aa)    
Predicted Functional Partners:
AM202_0310
Tetratricopeptide repeat (TPR) family protein.
 
 0.801
AM202_0809
Hypothetical protein.
  
 0.786
hepA
ATP-dependent helicase HepA.
    
  0.781
alaS
COG0013 Alanyl-tRNA synthetase.
   
 
  0.751
EEV25262.1
MiaB-like tRNA modifying enzyme YliG; COG0621 2-methylthioadenine synthetase.
     
 0.745
EEV24350.1
Hypothetical protein; COG0457 FOG: TPR repeat.
  
 0.745
EEV24563.1
Possible outer membrane protein, FOG: TPR repeat protein; COG0457 FOG: TPR repeat.
  
  
  0.664
apxIIA
ApxIIA.
  
     0.632
AM202_0154
Putative glycosyltransferase family 2 protein.
    
 0.610
EEV25264.1
Hypothetical protein.
 
     0.605
Your Current Organism:
Actinobacillus minor
NCBI taxonomy Id: 591023
Other names: A. minor 202, Actinobacillus minor 202, Actinobacillus minor str. 202, Actinobacillus minor strain 202
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