STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fucUFucose operon FucU protein. (143 aa)    
Predicted Functional Partners:
fucI
L-fucose isomerase.
 
  
 0.905
fucK
L-fuculokinase.
 
 
 0.723
fucA
L-fuculose phosphate aldolase.
  
  
 0.669
EEV24273.1
COG1070 Sugar (pentulose and hexulose) kinases.
 
 
 0.646
rbsC
Ribose ABC transporter permease protein.
    
  0.535
AM202_0409
Hypothetical protein.
    
  0.535
rbsA
D-ribose transporter ATP binding protein.
    
  0.485
ACH82224.1
ABC transporter ATP-binding protein.
    
  0.485
mglA
Galactoside transport ATP-binding protein MglA.
    
  0.485
rbsK
Ribokinase.
 
  
  0.448
Your Current Organism:
Actinobacillus minor
NCBI taxonomy Id: 591023
Other names: A. minor 202, Actinobacillus minor 202, Actinobacillus minor str. 202, Actinobacillus minor strain 202
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.