STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fucKL-fuculokinase. (472 aa)    
Predicted Functional Partners:
fucI
L-fucose isomerase.
 
 
 0.892
glpA
COG0578 Glycerol-3-phosphate dehydrogenase.
 
 
 0.808
fucA
L-fuculose phosphate aldolase.
 
 
 0.764
fucU
Fucose operon FucU protein.
 
 
 0.723
ptsH
PTS system phosphocarrier protein HPr.
    
  0.674
araD
COG0235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases.
  
 
 0.597
glpK
COG0554 Glycerol kinase.
  
 
0.592
EEV24870.1
COG0021 Transketolase.
  
 
 0.583
fabG
3-ketoacyl-(acyl-carrier-protein) reductase; COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases).
  
 
 0.571
EEV24289.1
Putative fatty acid oxidation complex alpha subunit; COG1024 Enoyl-CoA hydratase/carnithine racemase.
     
 0.548
Your Current Organism:
Actinobacillus minor
NCBI taxonomy Id: 591023
Other names: A. minor 202, Actinobacillus minor 202, Actinobacillus minor str. 202, Actinobacillus minor strain 202
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.