Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AM202_0714 | EEV24771.1 | AM202_0714 | AM202_01065 | Putative thioredoxin-like protein. | COG0225 Peptide methionine sulfoxide reductase. | 0.459 |
AM202_0714 | dipZ | AM202_0714 | AM202_04252 | Putative thioredoxin-like protein. | COG4232 Thiol:disulfide interchange protein. | 0.545 |
EEV24442.1 | EEV24771.1 | AM202_05779 | AM202_01065 | Thiol:disulfide interchange protein DsbC precursor; COG1651 Protein-disulfide isomerase. | COG0225 Peptide methionine sulfoxide reductase. | 0.483 |
EEV24442.1 | dipZ | AM202_05779 | AM202_04252 | Thiol:disulfide interchange protein DsbC precursor; COG1651 Protein-disulfide isomerase. | COG4232 Thiol:disulfide interchange protein. | 0.891 |
EEV24442.1 | dsbA | AM202_05779 | AM202_0240 | Thiol:disulfide interchange protein DsbC precursor; COG1651 Protein-disulfide isomerase. | Thiol:disulfide interchange protein dsbA precursor. | 0.569 |
EEV24448.1 | EEV24771.1 | AM202_05809 | AM202_01065 | Thiol:disulfide interchange protein DsbE; COG0526 Thiol-disulfide isomerase and thioredoxins. | COG0225 Peptide methionine sulfoxide reductase. | 0.999 |
EEV24448.1 | EEV25206.1 | AM202_05809 | AM202_03260 | Thiol:disulfide interchange protein DsbE; COG0526 Thiol-disulfide isomerase and thioredoxins. | Methionine sulfoxide reductase B; COG0229 Conserved domain frequently associated with peptide methionine sulfoxide reductase. | 0.522 |
EEV24448.1 | dipZ | AM202_05809 | AM202_04252 | Thiol:disulfide interchange protein DsbE; COG0526 Thiol-disulfide isomerase and thioredoxins. | COG4232 Thiol:disulfide interchange protein. | 0.834 |
EEV24771.1 | AM202_0714 | AM202_01065 | AM202_0714 | COG0225 Peptide methionine sulfoxide reductase. | Putative thioredoxin-like protein. | 0.459 |
EEV24771.1 | EEV24442.1 | AM202_01065 | AM202_05779 | COG0225 Peptide methionine sulfoxide reductase. | Thiol:disulfide interchange protein DsbC precursor; COG1651 Protein-disulfide isomerase. | 0.483 |
EEV24771.1 | EEV24448.1 | AM202_01065 | AM202_05809 | COG0225 Peptide methionine sulfoxide reductase. | Thiol:disulfide interchange protein DsbE; COG0526 Thiol-disulfide isomerase and thioredoxins. | 0.999 |
EEV24771.1 | EEV25051.1 | AM202_01065 | AM202_02475 | COG0225 Peptide methionine sulfoxide reductase. | Thioredoxin; COG0526 Thiol-disulfide isomerase and thioredoxins. | 0.459 |
EEV24771.1 | EEV25206.1 | AM202_01065 | AM202_03260 | COG0225 Peptide methionine sulfoxide reductase. | Methionine sulfoxide reductase B; COG0229 Conserved domain frequently associated with peptide methionine sulfoxide reductase. | 0.996 |
EEV24771.1 | EEV25260.1 | AM202_01065 | AM202_03530 | COG0225 Peptide methionine sulfoxide reductase. | COG0526 Thiol-disulfide isomerase and thioredoxins. | 0.483 |
EEV24771.1 | dipZ | AM202_01065 | AM202_04252 | COG0225 Peptide methionine sulfoxide reductase. | COG4232 Thiol:disulfide interchange protein. | 0.999 |
EEV24771.1 | dsbA | AM202_01065 | AM202_0240 | COG0225 Peptide methionine sulfoxide reductase. | Thiol:disulfide interchange protein dsbA precursor. | 0.483 |
EEV24771.1 | dsbE | AM202_01065 | AM202_0314 | COG0225 Peptide methionine sulfoxide reductase. | Putative disulfide bound formation protein E. | 0.999 |
EEV25051.1 | EEV24771.1 | AM202_02475 | AM202_01065 | Thioredoxin; COG0526 Thiol-disulfide isomerase and thioredoxins. | COG0225 Peptide methionine sulfoxide reductase. | 0.459 |
EEV25051.1 | dipZ | AM202_02475 | AM202_04252 | Thioredoxin; COG0526 Thiol-disulfide isomerase and thioredoxins. | COG4232 Thiol:disulfide interchange protein. | 0.681 |
EEV25206.1 | EEV24448.1 | AM202_03260 | AM202_05809 | Methionine sulfoxide reductase B; COG0229 Conserved domain frequently associated with peptide methionine sulfoxide reductase. | Thiol:disulfide interchange protein DsbE; COG0526 Thiol-disulfide isomerase and thioredoxins. | 0.522 |
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