Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
rplD | rpsB | AM202_0420 | AM202_0120 | 50S ribosomal protein L4. | 30S ribosomal protein S2. | 0.999 |
rplD | rpsC | AM202_0420 | AM202_0425 | 50S ribosomal protein L4. | 30S ribosomal protein S3. | 0.999 |
rplD | rpsE | AM202_0420 | AM202_0611 | 50S ribosomal protein L4. | 30S ribosomal protein S5. | 0.999 |
rplD | rpsH | AM202_0420 | AM202_0608 | 50S ribosomal protein L4. | 30S ribosomal protein S8. | 0.999 |
rplD | rpsL | AM202_0420 | AM202_03745 | 50S ribosomal protein L4. | COG0048 Ribosomal protein S12. | 0.999 |
rplD | rpsN | AM202_0420 | AM202_0607 | 50S ribosomal protein L4. | 30S ribosomal protein S14. | 0.999 |
rplD | rpsO | AM202_0420 | AM202_0830 | 50S ribosomal protein L4. | 30S ribosomal protein S15. | 0.999 |
rplD | rpsQ | AM202_0420 | AM202_0428 | 50S ribosomal protein L4. | 30S ribosomal protein S17. | 0.999 |
rplD | rpsS | AM202_0420 | AM202_0423 | 50S ribosomal protein L4. | 30S ribosomal protein S19. | 0.999 |
rplD | selB | AM202_0420 | AM202_0432 | 50S ribosomal protein L4. | Selenocysteine-specific elongation factor. | 0.999 |
rpsB | rplD | AM202_0120 | AM202_0420 | 30S ribosomal protein S2. | 50S ribosomal protein L4. | 0.999 |
rpsB | rpsC | AM202_0120 | AM202_0425 | 30S ribosomal protein S2. | 30S ribosomal protein S3. | 0.999 |
rpsB | rpsE | AM202_0120 | AM202_0611 | 30S ribosomal protein S2. | 30S ribosomal protein S5. | 0.999 |
rpsB | rpsH | AM202_0120 | AM202_0608 | 30S ribosomal protein S2. | 30S ribosomal protein S8. | 0.999 |
rpsB | rpsL | AM202_0120 | AM202_03745 | 30S ribosomal protein S2. | COG0048 Ribosomal protein S12. | 0.999 |
rpsB | rpsN | AM202_0120 | AM202_0607 | 30S ribosomal protein S2. | 30S ribosomal protein S14. | 0.999 |
rpsB | rpsO | AM202_0120 | AM202_0830 | 30S ribosomal protein S2. | 30S ribosomal protein S15. | 0.999 |
rpsB | rpsQ | AM202_0120 | AM202_0428 | 30S ribosomal protein S2. | 30S ribosomal protein S17. | 0.999 |
rpsB | rpsS | AM202_0120 | AM202_0423 | 30S ribosomal protein S2. | 30S ribosomal protein S19. | 0.999 |
rpsB | selB | AM202_0120 | AM202_0432 | 30S ribosomal protein S2. | Selenocysteine-specific elongation factor. | 0.998 |
page 1 of 6