STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AM202_0434Predicted transcriptional regulator of sugar metabolism. (253 aa)    
Predicted Functional Partners:
EEV25022.1
COG3925 N-terminal domain of the phosphotransferase system fructose-specific component IIB.
 
  
 0.747
fruK
1-phosphofructokinase; COG1105 Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB).
 
  
 0.737
glmS
Glucosamine--fructose-6-phosphate aminotransferase (isomerizing).
  
    0.686
fabG
3-ketoacyl-(acyl-carrier-protein) reductase; COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases).
  
    0.510
syp
prolyl-tRNA synthetase; 3' end; 5' end is gene AM202_0433 on contig Contig_138.
       0.482
ppnK
Inorganic polyphosphate/ATP-NAD kinase; COG0061 Predicted sugar kinase.
   
 
  0.478
EEV25069.1
Ascorbate-specific PTS system enzyme IIC/IIB; COG3037 Uncharacterized protein conserved in bacteria.
     
 0.405
EEV24497.1
COG3412 Uncharacterized protein conserved in bacteria.
  
  
 0.402
rbsD
High affinity ribose transport protein RbsD.
     
 0.401
Your Current Organism:
Actinobacillus minor
NCBI taxonomy Id: 591023
Other names: A. minor 202, Actinobacillus minor 202, Actinobacillus minor str. 202, Actinobacillus minor strain 202
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