STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
glmSGlucosamine--fructose-6-phosphate aminotransferase (isomerizing). (610 aa)    
Predicted Functional Partners:
glmU
COG1207 N-acetylglucosamine-1-phosphate uridyltransferase (contains nucleotidyltransferase and I-patch acetyltransferase domains).
 
 0.932
dapE
Succinyl-diaminopimelate desuccinylase.
   
 0.891
EEV24720.1
COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases.
   
 0.890
EEV24318.1
COG0046 Phosphoribosylformylglycinamidine (FGAM) synthase, synthetase domain.
    
 0.817
ptsB
PTS system sucrose-specific EIIBC component.
    
 0.803
AM202_0406
Hypothetical protein.
    
 0.803
EEV24916.1
COG1109 Phosphomannomutase.
 
 
 0.790
ribD
Riboflavin biosynthesis protein.
      
 0.746
nagA
COG1820 N-acetylglucosamine-6-phosphate deacetylase.
    
 0.732
EEV25247.1
COG0151 Phosphoribosylamine-glycine ligase.
    
 0.724
Your Current Organism:
Actinobacillus minor
NCBI taxonomy Id: 591023
Other names: A. minor 202, Actinobacillus minor 202, Actinobacillus minor str. 202, Actinobacillus minor strain 202
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