STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dnaQDNA polymerase III subunit epsilon. (255 aa)    
Predicted Functional Partners:
dnaE
COG0587 DNA polymerase III, alpha subunit.
   
 0.981
EEV24522.1
COG0592 DNA polymerase sliding clamp subunit (PCNA homolog).
 
 0.975
EEV25040.1
COG2812 DNA polymerase III, gamma/tau subunits.
  
 0.971
holA
COG1466 DNA polymerase III, delta subunit.
    
 0.927
rnhA
Ribonuclease HI.
 
 
 0.918
EEV25138.1
DNA polymerase III subunit delta; COG0470 ATPase involved in DNA replication.
   
 0.826
guaA
Bifunctional GMP synthase/glutamine amidotransferase protein.
  
 
 0.794
EEV24606.1
COG0514 Superfamily II DNA helicase.
    
 0.786
dnaB
Replicative DNA helicase.
    
 0.782
recX
Regulatory protein RecX.
       0.773
Your Current Organism:
Actinobacillus minor
NCBI taxonomy Id: 591023
Other names: A. minor 202, Actinobacillus minor 202, Actinobacillus minor str. 202, Actinobacillus minor strain 202
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.