STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
parEDNA topoisomerase IV subunit B. (636 aa)    
Predicted Functional Partners:
EEV24421.1
COG0188 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit.
 0.995
EEV25049.1
COG0188 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit.
 0.994
EEV24599.1
DNA polymerase I; COG0258 5'-3' exonuclease (including N-terminal domain of PolI).
  
 0.855
EEV25360.1
Lipid transporter ATP-binding/permease protein; COG1132 ABC-type multidrug transport system, ATPase and permease components.
  
 
 0.783
EEV24626.1
Ribonuclease T; COG0847 DNA polymerase III, epsilon subunit and related 3'-5' exonucleases.
  
  
 0.781
dnaK
Chaperone protein dnaK.
  
 
 0.764
EEV25098.1
COG0631 Serine/threonine protein phosphatase.
   
 
  0.746
hscA
Chaperone protein HscA; COG0443 Molecular chaperone.
  
 
 0.735
AM202_0339
Hypothetical ABC transporter ATP-binding protein.
    
 0.728
AM202_0807
ABC transporter ATP-binding protein.
    
 0.728
Your Current Organism:
Actinobacillus minor
NCBI taxonomy Id: 591023
Other names: A. minor 202, Actinobacillus minor 202, Actinobacillus minor str. 202, Actinobacillus minor strain 202
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