STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AM202_0478Hypothetical protein. (576 aa)    
Predicted Functional Partners:
AM202_0479
Hypothetical protein.
     
 0.798
gmhA
Putative phosphoheptose isomerase.
  
    0.744
zipA
Cell division ZipA-like protein.
  
     0.743
EEV24691.1
COG5009 Membrane carboxypeptidase/penicillin-binding protein.
    
 
 0.741
EEV25030.1
HemY-like protein; COG3071 Uncharacterized enzyme of heme biosynthesis.
  
     0.738
hly
21 kDa hemolysin precursor.
  
    0.683
EEV25448.1
Outer membrane protein P5 precursor (OMP P5); COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins.
  
     0.630
EEV24923.1
COG3171 Uncharacterized protein conserved in bacteria.
  
     0.613
lolB
COG3017 Outer membrane lipoprotein involved in outer membrane biogenesis.
  
     0.605
AM202_0562
Hypothetical protein.
  
     0.593
Your Current Organism:
Actinobacillus minor
NCBI taxonomy Id: 591023
Other names: A. minor 202, Actinobacillus minor 202, Actinobacillus minor str. 202, Actinobacillus minor strain 202
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.