STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gmhAPutative phosphoheptose isomerase. (192 aa)    
Predicted Functional Partners:
gmhB
D,D-heptose 1,7-bisphosphate phosphatase.
 
 
 0.928
EEV25202.1
Bifunctional heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase; COG2870 ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase.
  
 0.884
hly
21 kDa hemolysin precursor.
  
    0.790
EEV24968.1
Imidazole glycerol-phosphate dehydratase/histidinol phosphatase; COG0241 Histidinol phosphatase and related phosphatases.
  
 
 0.787
hldD
ADP-L-glycero-D-manno-heptose-6-epimerase.
 
 
 0.749
AM202_0479
Hypothetical protein.
  
    0.746
AM202_0478
Hypothetical protein.
  
    0.744
dnaA
COG0593 ATPase involved in DNA replication initiation.
    
 0.671
gmhA-2
COG0279 Phosphoheptose isomerase.
  
  
 
0.669
EEV25311.1
COG0859 ADP-heptose:LPS heptosyltransferase.
 
  
 0.610
Your Current Organism:
Actinobacillus minor
NCBI taxonomy Id: 591023
Other names: A. minor 202, Actinobacillus minor 202, Actinobacillus minor str. 202, Actinobacillus minor strain 202
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.