STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
relAGTP pyrophosphokinase. (731 aa)    
Predicted Functional Partners:
rpsF
COG0360 Ribosomal protein S6.
  
   0.883
EEV25194.1
Aerobic respiration control sensor protein; COG0642 Signal transduction histidine kinase.
 
 
 0.855
rplJ
50S ribosomal protein L10.
  
   0.855
rpsM
30S ribosomal protein S13.
    
  0.847
rplC
50S ribosomal protein L3.
    
  0.831
rplK
50S ribosomal protein L11.
   
 
 0.826
rpsL
COG0048 Ribosomal protein S12.
    
 
 0.820
rpsE
30S ribosomal protein S5.
   
 
 0.820
rpsI
COG0103 Ribosomal protein S9.
   
 
 0.818
rplB
50S ribosomal protein L2.
   
   0.817
Your Current Organism:
Actinobacillus minor
NCBI taxonomy Id: 591023
Other names: A. minor 202, Actinobacillus minor 202, Actinobacillus minor str. 202, Actinobacillus minor strain 202
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.