Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AM202_0042 | EEV24264.1 | AM202_0042 | AM202_04880 | Hypothetical protein. | COG2916 DNA-binding protein H-NS. | 0.749 |
AM202_0042 | EEV24388.1 | AM202_0042 | AM202_05509 | Hypothetical protein. | COG3771 Predicted membrane protein. | 0.773 |
AM202_0042 | EEV24403.1 | AM202_0042 | AM202_05584 | Hypothetical protein. | COG3082 Uncharacterized protein conserved in bacteria. | 0.617 |
AM202_0042 | EEV24514.1 | AM202_0042 | AM202_06143 | Hypothetical protein. | Hypothetical protein. | 0.539 |
AM202_0042 | rseA | AM202_0042 | AM202_0521 | Hypothetical protein. | Putative sigma-E factor negative regulatory protein. | 0.632 |
AM202_0042 | rseC | AM202_0042 | AM202_0519 | Hypothetical protein. | Putative sigma-E factor regulatory protein. | 0.482 |
EEV24264.1 | AM202_0042 | AM202_04880 | AM202_0042 | COG2916 DNA-binding protein H-NS. | Hypothetical protein. | 0.749 |
EEV24264.1 | EEV24388.1 | AM202_04880 | AM202_05509 | COG2916 DNA-binding protein H-NS. | COG3771 Predicted membrane protein. | 0.730 |
EEV24264.1 | EEV24403.1 | AM202_04880 | AM202_05584 | COG2916 DNA-binding protein H-NS. | COG3082 Uncharacterized protein conserved in bacteria. | 0.676 |
EEV24264.1 | EEV24514.1 | AM202_04880 | AM202_06143 | COG2916 DNA-binding protein H-NS. | Hypothetical protein. | 0.499 |
EEV24264.1 | rseA | AM202_04880 | AM202_0521 | COG2916 DNA-binding protein H-NS. | Putative sigma-E factor negative regulatory protein. | 0.625 |
EEV24264.1 | rseC | AM202_04880 | AM202_0519 | COG2916 DNA-binding protein H-NS. | Putative sigma-E factor regulatory protein. | 0.509 |
EEV24388.1 | AM202_0042 | AM202_05509 | AM202_0042 | COG3771 Predicted membrane protein. | Hypothetical protein. | 0.773 |
EEV24388.1 | EEV24264.1 | AM202_05509 | AM202_04880 | COG3771 Predicted membrane protein. | COG2916 DNA-binding protein H-NS. | 0.730 |
EEV24388.1 | EEV24403.1 | AM202_05509 | AM202_05584 | COG3771 Predicted membrane protein. | COG3082 Uncharacterized protein conserved in bacteria. | 0.724 |
EEV24388.1 | EEV24514.1 | AM202_05509 | AM202_06143 | COG3771 Predicted membrane protein. | Hypothetical protein. | 0.700 |
EEV24388.1 | rseA | AM202_05509 | AM202_0521 | COG3771 Predicted membrane protein. | Putative sigma-E factor negative regulatory protein. | 0.749 |
EEV24388.1 | rseB | AM202_05509 | AM202_0520 | COG3771 Predicted membrane protein. | Putative periplasmic negative regulator of sigmaE. | 0.481 |
EEV24388.1 | rseC | AM202_05509 | AM202_0519 | COG3771 Predicted membrane protein. | Putative sigma-E factor regulatory protein. | 0.610 |
EEV24403.1 | AM202_0042 | AM202_05584 | AM202_0042 | COG3082 Uncharacterized protein conserved in bacteria. | Hypothetical protein. | 0.617 |
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