STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rseCPutative sigma-E factor regulatory protein. (149 aa)    
Predicted Functional Partners:
rseB
Putative periplasmic negative regulator of sigmaE.
 
  
 0.979
rseA
Putative sigma-E factor negative regulatory protein.
 
  
 0.861
lcfA
long-chain-fatty-acid--CoA ligase.
       0.773
upp
Uracil phosphoribosyltransferase.
       0.714
EEV24403.1
COG3082 Uncharacterized protein conserved in bacteria.
  
     0.653
EEV24388.1
COG3771 Predicted membrane protein.
  
     0.610
EEV24264.1
COG2916 DNA-binding protein H-NS.
  
     0.509
AM202_0042
Hypothetical protein.
  
     0.482
rpoE
RNA polymerase sigma factor RpoE.
  
  
 0.416
EEV24514.1
Hypothetical protein.
  
     0.415
Your Current Organism:
Actinobacillus minor
NCBI taxonomy Id: 591023
Other names: A. minor 202, Actinobacillus minor 202, Actinobacillus minor str. 202, Actinobacillus minor strain 202
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