STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AM202_0523Predicted rRNA methyltransferase. (334 aa)    
Predicted Functional Partners:
truD
tRNA pseudouridine synthase D.
  
   0.831
EEV24848.1
Hypothetical protein; COG0799 Uncharacterized homolog of plant Iojap protein.
   
   0.815
rplU
COG0261 Ribosomal protein L21.
   
   0.815
rplQ
50S ribosomal protein L17.
  
   0.814
rplK
50S ribosomal protein L11.
   
   0.813
rplO
50S ribosomal protein L15.
  
   0.813
rplM
COG0102 Ribosomal protein L13.
  
   0.812
EEV24975.1
COG0236 Acyl carrier protein.
    
   0.810
engB
Putative GTP-binding protein EngB.
   
   0.810
rplC
50S ribosomal protein L3.
   
   0.809
Your Current Organism:
Actinobacillus minor
NCBI taxonomy Id: 591023
Other names: A. minor 202, Actinobacillus minor 202, Actinobacillus minor str. 202, Actinobacillus minor strain 202
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.