STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEV24335.1COG0289 Dihydrodipicolinate reductase. (270 aa)    
Predicted Functional Partners:
EEV24492.1
COG0329 Dihydrodipicolinate synthase/N-acetylneuraminate lyase.
 
 
 0.956
lysA
Diaminopimelate decarboxylase.
 
 
 0.911
EEV24429.1
N-acetylneuraminate lyase; COG0329 Dihydrodipicolinate synthase/N-acetylneuraminate lyase.
 
 
 0.895
dapD
2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase; 3' end; 5' end is gene AM202_0134 on contig Contig_78.
  
 
 0.793
AM202_0688
Probable aminotransferase.
    
 0.732
EEV24334.1
COG0626 Cystathionine beta-lyases/cystathionine gamma-synthases.
     
 0.730
mgsA
Methylglyoxal synthase.
  
    0.690
thrA
Bifunctional aspartokinase/homoserine dehydrogenase.
  
 
 0.674
dnaJ
Chaperone protein dnaJ.
 
  
 0.670
dapE
Succinyl-diaminopimelate desuccinylase.
  
 0.647
Your Current Organism:
Actinobacillus minor
NCBI taxonomy Id: 591023
Other names: A. minor 202, Actinobacillus minor 202, Actinobacillus minor str. 202, Actinobacillus minor strain 202
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