STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fisDNA-binding protein Fis. (97 aa)    
Predicted Functional Partners:
dus
tRNA-dihydrouridine synthase B.
  
  
 0.958
EEV24599.1
DNA polymerase I; COG0258 5'-3' exonuclease (including N-terminal domain of PolI).
   
   0.664
dusC
tRNA-dihydrouridine synthase C.
  
  
 0.600
EEV24536.1
COG0042 tRNA-dihydrouridine synthase.
  
  
 0.600
EEV25249.1
COG2965 Primosomal replication protein N.
   
    0.545
rpsR
COG0238 Ribosomal protein S18.
   
    0.493
EEV24890.1
COG0594 RNase P protein component.
  
    0.474
EEV24910.1
COG1589 Cell division septal protein.
  
     0.457
EEV24337.1
Stringent starvation protein A-like protein; COG0625 Glutathione S-transferase.
  
   
 0.445
sixA
Possible phosphohistidine phosphatase.
       0.444
Your Current Organism:
Actinobacillus minor
NCBI taxonomy Id: 591023
Other names: A. minor 202, Actinobacillus minor 202, Actinobacillus minor str. 202, Actinobacillus minor strain 202
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.