STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rncRibonuclease III; COG0571 dsRNA-specific ribonuclease. (223 aa)    
Predicted Functional Partners:
rpsI
COG0103 Ribosomal protein S9.
  
 
 0.919
rplS
50S ribosomal protein L19.
 
 
 0.916
rplM
COG0102 Ribosomal protein L13.
  
 
 0.912
EEV24370.1
COG0613 Predicted metal-dependent phosphoesterases (PHP family).
      0.888
rpsF
COG0360 Ribosomal protein S6.
   
 
 0.886
rpmA
COG0211 Ribosomal protein L27.
  
 
 0.884
rpsO
30S ribosomal protein S15.
   
 
 0.883
rpsB
30S ribosomal protein S2.
 
 
 0.879
rpmF
COG0333 Ribosomal protein L32.
  
   0.879
rpsL
COG0048 Ribosomal protein S12.
  
 
 0.875
Your Current Organism:
Actinobacillus minor
NCBI taxonomy Id: 591023
Other names: A. minor 202, Actinobacillus minor 202, Actinobacillus minor str. 202, Actinobacillus minor strain 202
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.