STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rplMCOG0102 Ribosomal protein L13. (142 aa)    
Predicted Functional Partners:
rplO
50S ribosomal protein L15.
 
 0.999
rplC
50S ribosomal protein L3.
 
 0.998
rpsI
COG0103 Ribosomal protein S9.
 
 
 0.998
rplR
50S ribosomal protein L18.
  
 0.998
rplA
50S ribosomal protein L1.
 
 0.997
rplJ
50S ribosomal protein L10.
   
 0.997
rplW
50S ribosomal protein L23.
  
 0.997
rplV
50S ribosomal protein L22.
  
 0.997
rplP
50S ribosomal protein L16.
 
 0.997
rpmD
50S ribosomal protein L30.
  
 0.997
Your Current Organism:
Actinobacillus minor
NCBI taxonomy Id: 591023
Other names: A. minor 202, Actinobacillus minor 202, Actinobacillus minor str. 202, Actinobacillus minor strain 202
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.