STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEV24423.1COG4785 Lipoprotein NlpI, contains TPR repeats. (308 aa)    
Predicted Functional Partners:
EEV24792.1
COG0793 Periplasmic protease.
  
 
 
 0.845
AM202_0335
Hypothetical protein.
  
     0.769
metJ
Transcriptional repressor protein.
  
     0.762
seqA
DNA replication inhibitor protein.
  
     0.753
EEV25355.1
COG3092 Uncharacterized protein conserved in bacteria.
  
     0.752
EEV24793.1
Putative solute/DNA competence effector; COG3109 Activator of osmoprotectant transporter ProP.
  
   
 0.744
EEV24879.1
COG3117 Uncharacterized protein conserved in bacteria.
  
   
 0.724
EEV24518.1
COG2980 Rare lipoprotein B.
  
     0.724
EEV24854.1
Hypothetical protein.
  
     0.716
EEV25143.1
COG3078 Uncharacterized protein conserved in bacteria.
  
     0.716
Your Current Organism:
Actinobacillus minor
NCBI taxonomy Id: 591023
Other names: A. minor 202, Actinobacillus minor 202, Actinobacillus minor str. 202, Actinobacillus minor strain 202
Server load: medium (60%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.