STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mltCCOG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains). (360 aa)    
Predicted Functional Partners:
EEV24478.1
COG2924 Fe-S cluster protector protein.
  
    0.734
EEV24477.1
COG1194 A/G-specific DNA glycosylase.
  
    0.701
amiB
Putative N-acetylmuramoyl-L-alanine amidase AmiB precursor.
 
 
 0.670
EEV24223.1
COG3691 Uncharacterized protein conserved in bacteria.
  
     0.571
EEV24419.1
Condesin subunit E; COG3095 Uncharacterized protein involved in chromosome partitioning.
  
     0.563
EEV24420.1
Condesin subunit F; COG3006 Uncharacterized protein involved in chromosome partitioning.
  
     0.554
mukB
Cell division protein MukB; COG3096 Uncharacterized protein involved in chromosome partitioning.
  
     0.531
EEV24475.1
COG1489 DNA-binding protein, stimulates sugar fermentation.
       0.475
EEV24476.1
COG0346 Lactoylglutathione lyase and related lyases.
       0.475
ftsL
Cell division protein FtsL.
  
     0.466
Your Current Organism:
Actinobacillus minor
NCBI taxonomy Id: 591023
Other names: A. minor 202, Actinobacillus minor 202, Actinobacillus minor str. 202, Actinobacillus minor strain 202
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.