STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEV24488.1COG0572 Uridine kinase. (219 aa)    
Predicted Functional Partners:
EEV24918.1
COG0111 Phosphoglycerate dehydrogenase and related dehydrogenases.
   
  0.993
hepA
ATP-dependent helicase HepA.
    
 0.983
upp
Uracil phosphoribosyltransferase.
  
 0.944
dcd
COG0717 Deoxycytidine deaminase.
    
 0.902
EEV25205.1
COG0057 Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase.
   
 0.892
dnaJ
Chaperone protein dnaJ.
   
 0.841
ribD
Riboflavin biosynthesis protein.
  
  0.782
rhlB
ATP-dependent RNA helicase RhlB.
  
  0.756
srmB
ATP-dependent RNA helicase.
  
  0.756
EEV24424.1
Cold-shock DEAD box protein A-like protein; COG0513 Superfamily II DNA and RNA helicases.
  
  0.756
Your Current Organism:
Actinobacillus minor
NCBI taxonomy Id: 591023
Other names: A. minor 202, Actinobacillus minor 202, Actinobacillus minor str. 202, Actinobacillus minor strain 202
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.