STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tgtCOG0343 Queuine/archaeosine tRNA-ribosyltransferase. (380 aa)    
Predicted Functional Partners:
queA
COG0809 S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine synthetase).
 
 
 0.981
queF
NADPH-dependent 7-cyano-7-deazaguanine reductase.
    
 0.823
AM202_0574
Hypothetical protein.
    
 0.698
EEV24511.1
Hypothetical protein.
       0.648
EEV24370.1
COG0613 Predicted metal-dependent phosphoesterases (PHP family).
    
  0.631
guaA
Bifunctional GMP synthase/glutamine amidotransferase protein.
   
  
 0.617
EEV24510.1
COG0425 Predicted redox protein, regulator of disulfide bond formation.
       0.607
EEV24513.1
Hypothetical protein.
       0.584
AM202_0351
Hypothetical protein.
    
 0.555
EEV24749.1
COG0545 FKBP-type peptidyl-prolyl cis-trans isomerases 1.
    
  0.542
Your Current Organism:
Actinobacillus minor
NCBI taxonomy Id: 591023
Other names: A. minor 202, Actinobacillus minor 202, Actinobacillus minor str. 202, Actinobacillus minor strain 202
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.