STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rpmJ-250S ribosomal protein L36. (37 aa)    
Predicted Functional Partners:
rpsE
30S ribosomal protein S5.
  
 
 0.993
rpmD
50S ribosomal protein L30.
  
 
 0.993
rplO
50S ribosomal protein L15.
  
 
 0.993
rplF
50S ribosomal protein L6.
  
 
 0.992
rplR
50S ribosomal protein L18.
  
 
 0.992
rpsH
30S ribosomal protein S8.
  
 
 0.991
rpsN
30S ribosomal protein S14.
  
 
 0.990
rplX
50S ribosomal protein L24.
  
 
 0.989
rplE
50S ribosomal protein L5.
  
 
 0.988
rpsM
30S ribosomal protein S13.
  
 
 0.988
Your Current Organism:
Actinobacillus minor
NCBI taxonomy Id: 591023
Other names: A. minor 202, Actinobacillus minor 202, Actinobacillus minor str. 202, Actinobacillus minor strain 202
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.