Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EEV25304.1 | rplD | AM202_03750 | AM202_0420 | COG0049 Ribosomal protein S7. | 50S ribosomal protein L4. | 0.999 |
EEV25304.1 | rplP | AM202_03750 | AM202_0426 | COG0049 Ribosomal protein S7. | 50S ribosomal protein L16. | 0.998 |
EEV25304.1 | rpsA | AM202_03750 | AM202_05519 | COG0049 Ribosomal protein S7. | COG0539 Ribosomal protein S1. | 0.995 |
EEV25304.1 | rpsB | AM202_03750 | AM202_0120 | COG0049 Ribosomal protein S7. | 30S ribosomal protein S2. | 0.999 |
EEV25304.1 | rpsC | AM202_03750 | AM202_0425 | COG0049 Ribosomal protein S7. | 30S ribosomal protein S3. | 0.999 |
EEV25304.1 | rpsD | AM202_03750 | AM202_0618 | COG0049 Ribosomal protein S7. | 30S ribosomal protein S4. | 0.999 |
EEV25304.1 | rpsJ | AM202_03750 | AM202_0418 | COG0049 Ribosomal protein S7. | 30S ribosomal protein S10. | 0.999 |
EEV25304.1 | rpsL | AM202_03750 | AM202_03745 | COG0049 Ribosomal protein S7. | COG0048 Ribosomal protein S12. | 0.999 |
EEV25304.1 | rpsQ | AM202_03750 | AM202_0428 | COG0049 Ribosomal protein S7. | 30S ribosomal protein S17. | 0.999 |
EEV25304.1 | rpsS | AM202_03750 | AM202_0423 | COG0049 Ribosomal protein S7. | 30S ribosomal protein S19. | 0.999 |
rplD | EEV25304.1 | AM202_0420 | AM202_03750 | 50S ribosomal protein L4. | COG0049 Ribosomal protein S7. | 0.999 |
rplD | rplP | AM202_0420 | AM202_0426 | 50S ribosomal protein L4. | 50S ribosomal protein L16. | 0.999 |
rplD | rpsA | AM202_0420 | AM202_05519 | 50S ribosomal protein L4. | COG0539 Ribosomal protein S1. | 0.995 |
rplD | rpsB | AM202_0420 | AM202_0120 | 50S ribosomal protein L4. | 30S ribosomal protein S2. | 0.999 |
rplD | rpsC | AM202_0420 | AM202_0425 | 50S ribosomal protein L4. | 30S ribosomal protein S3. | 0.999 |
rplD | rpsD | AM202_0420 | AM202_0618 | 50S ribosomal protein L4. | 30S ribosomal protein S4. | 0.999 |
rplD | rpsJ | AM202_0420 | AM202_0418 | 50S ribosomal protein L4. | 30S ribosomal protein S10. | 0.999 |
rplD | rpsL | AM202_0420 | AM202_03745 | 50S ribosomal protein L4. | COG0048 Ribosomal protein S12. | 0.999 |
rplD | rpsQ | AM202_0420 | AM202_0428 | 50S ribosomal protein L4. | 30S ribosomal protein S17. | 0.999 |
rplD | rpsS | AM202_0420 | AM202_0423 | 50S ribosomal protein L4. | 30S ribosomal protein S19. | 0.999 |
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