STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ntpACOG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes. (145 aa)    
Predicted Functional Partners:
rhlB
ATP-dependent RNA helicase RhlB.
   
 0.829
srmB
ATP-dependent RNA helicase.
   
 0.829
EEV24424.1
Cold-shock DEAD box protein A-like protein; COG0513 Superfamily II DNA and RNA helicases.
   
 0.829
vacB
Ribonuclease R.
   
 0.774
ribBA
Riboflavin biosynthesis protein.
   
  0.772
rnc
Ribonuclease III; COG0571 dsRNA-specific ribonuclease.
    
 0.766
EEV25194.1
Aerobic respiration control sensor protein; COG0642 Signal transduction histidine kinase.
 
 
 0.723
folE
COG0302 GTP cyclohydrolase I.
    
  0.653
rph
Ribonuclease PH.
     
 0.650
EEV24532.1
Hypothetical protein.
  
    0.648
Your Current Organism:
Actinobacillus minor
NCBI taxonomy Id: 591023
Other names: A. minor 202, Actinobacillus minor 202, Actinobacillus minor str. 202, Actinobacillus minor strain 202
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.