STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
recGATP-dependent DNA helicase. (693 aa)    
Predicted Functional Partners:
EEV24606.1
COG0514 Superfamily II DNA helicase.
   
 
 0.872
ruvA
COG0632 Holliday junction resolvasome, DNA-binding subunit.
  
  
 0.844
uvrD
DNA helicase II.
 
 
 0.811
rep
ATP-dependent DNA helicase.
 
 
 0.798
dnaB
Replicative DNA helicase.
    
 0.744
EEV25131.1
Recombination protein 2; COG0658 Predicted membrane metal-binding protein.
 
   
 0.577
EEV24599.1
DNA polymerase I; COG0258 5'-3' exonuclease (including N-terminal domain of PolI).
 
   
 0.566
EEV24211.1
Hypothetical protein; COG2378 Predicted transcriptional regulator.
   
 
  0.558
smf
Protein smf (DNA-processing chain A).
  
     0.553
AM202_0642
Deoxyguanosine triphosphate triphosphohydrolase.
       0.546
Your Current Organism:
Actinobacillus minor
NCBI taxonomy Id: 591023
Other names: A. minor 202, Actinobacillus minor 202, Actinobacillus minor str. 202, Actinobacillus minor strain 202
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