STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rbfARibosome-binding factor A. (126 aa)    
Predicted Functional Partners:
infB
Translation initiation factor IF-2.
  
  
 0.888
truB
tRNA pseudouridine synthase B; 3' end; 5' end is gene AM202_0673 on contig Contig_92.
  
  
 0.884
EEV25304.1
COG0049 Ribosomal protein S7.
   
 
 0.866
rpsQ
30S ribosomal protein S17.
   
 
 0.863
rpsE
30S ribosomal protein S5.
   
 
 0.858
rpsR
COG0238 Ribosomal protein S18.
  
 
 0.854
rpsO
30S ribosomal protein S15.
  
 
 0.852
rpsK
30S ribosomal protein S11.
   
   0.829
rpsD
30S ribosomal protein S4.
   
 
 0.826
rpsF
COG0360 Ribosomal protein S6.
  
 
 0.800
Your Current Organism:
Actinobacillus minor
NCBI taxonomy Id: 591023
Other names: A. minor 202, Actinobacillus minor 202, Actinobacillus minor str. 202, Actinobacillus minor strain 202
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.