Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AM202_0685 | AM202_0686 | AM202_0685 | AM202_0686 | Lysine exporter protein. | Hypothetical protein. | 0.805 |
AM202_0685 | AM202_0687 | AM202_0685 | AM202_0687 | Lysine exporter protein. | Hypothetical protein. | 0.804 |
AM202_0685 | priA | AM202_0685 | AM202_0684 | Lysine exporter protein. | Primosomal protein N'. | 0.773 |
AM202_0686 | AM202_0685 | AM202_0686 | AM202_0685 | Hypothetical protein. | Lysine exporter protein. | 0.805 |
AM202_0686 | AM202_0687 | AM202_0686 | AM202_0687 | Hypothetical protein. | Hypothetical protein. | 0.785 |
AM202_0686 | priA | AM202_0686 | AM202_0684 | Hypothetical protein. | Primosomal protein N'. | 0.773 |
AM202_0687 | AM202_0685 | AM202_0687 | AM202_0685 | Hypothetical protein. | Lysine exporter protein. | 0.804 |
AM202_0687 | AM202_0686 | AM202_0687 | AM202_0686 | Hypothetical protein. | Hypothetical protein. | 0.785 |
AM202_0687 | priA | AM202_0687 | AM202_0684 | Hypothetical protein. | Primosomal protein N'. | 0.773 |
EEV24482.1 | EEV24606.1 | AM202_05983 | AM202_00230 | Recombination factor protein RarA; COG2256 ATPase related to the helicase subunit of the Holliday junction resolvase. | COG0514 Superfamily II DNA helicase. | 0.934 |
EEV24482.1 | dnaB | AM202_05983 | AM202_0086 | Recombination factor protein RarA; COG2256 ATPase related to the helicase subunit of the Holliday junction resolvase. | Replicative DNA helicase. | 0.775 |
EEV24482.1 | priA | AM202_05983 | AM202_0684 | Recombination factor protein RarA; COG2256 ATPase related to the helicase subunit of the Holliday junction resolvase. | Primosomal protein N'. | 0.757 |
EEV24585.1 | EEV24606.1 | AM202_00125 | AM202_00230 | TraA; conjugal transfer protein TraA. | COG0514 Superfamily II DNA helicase. | 0.642 |
EEV24585.1 | dnaB | AM202_00125 | AM202_0086 | TraA; conjugal transfer protein TraA. | Replicative DNA helicase. | 0.765 |
EEV24585.1 | dnaG | AM202_00125 | AM202_0161 | TraA; conjugal transfer protein TraA. | DNA primase. | 0.775 |
EEV24585.1 | priA | AM202_00125 | AM202_0684 | TraA; conjugal transfer protein TraA. | Primosomal protein N'. | 0.776 |
EEV24606.1 | EEV24482.1 | AM202_00230 | AM202_05983 | COG0514 Superfamily II DNA helicase. | Recombination factor protein RarA; COG2256 ATPase related to the helicase subunit of the Holliday junction resolvase. | 0.934 |
EEV24606.1 | EEV24585.1 | AM202_00230 | AM202_00125 | COG0514 Superfamily II DNA helicase. | TraA; conjugal transfer protein TraA. | 0.642 |
EEV24606.1 | EEV25214.1 | AM202_00230 | AM202_03300 | COG0514 Superfamily II DNA helicase. | COG0629 Single-stranded DNA-binding protein. | 0.602 |
EEV24606.1 | EEV25249.1 | AM202_00230 | AM202_03475 | COG0514 Superfamily II DNA helicase. | COG2965 Primosomal replication protein N. | 0.772 |
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