STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
exbB2Biopolymer transport protein ExbB2. (149 aa)    
Predicted Functional Partners:
exbD2
Biopolymer transport protein ExbD2.
 
 0.997
tonB2
TonB2 energy transducing protein.
 
 0.991
EEV25221.1
Colicin uptake protein TolR; COG0848 Biopolymer transport protein.
 
 0.948
EEV24998.1
S-layer protein.
  
 0.861
EEV24670.1
CirA protein; COG4771 Outer membrane receptor for ferrienterochelin and colicins.
 
  
 0.683
AM202_0316
Predicted TonB dependent/ligand-gated channel.
  
 
 0.598
hmbR2
Hemoglobin receptor.
  
 
 0.598
hugZ
Heme utilization protein.
  
  
 0.592
tolB
Translocation protein TolB; COG0823 Periplasmic component of the Tol biopolymer transport system.
  
  
 0.583
fhuA
Outer membrane ferric hydroxamate receptor FhuA.
  
 
 0.555
Your Current Organism:
Actinobacillus minor
NCBI taxonomy Id: 591023
Other names: A. minor 202, Actinobacillus minor 202, Actinobacillus minor str. 202, Actinobacillus minor strain 202
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