STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
glpEThiosulfate sulfurtransferase GlpE. (108 aa)    
Predicted Functional Partners:
ACE87879.1
Putative metal-dependent hydrolase.
    
  0.894
rpsQ
30S ribosomal protein S17.
   
  0.825
sodA
Manganese superoxide dismutase.
   
 
 0.806
truA
COG0101 Pseudouridylate synthase.
    
 0.769
EEV24972.1
Hypothetical protein; COG0277 FAD/FMN-containing dehydrogenases.
    
 0.720
rplQ
50S ribosomal protein L17.
   
   0.691
rplU
COG0261 Ribosomal protein L21.
   
   0.686
metH
COG0646 Methionine synthase I (cobalamin-dependent), methyltransferase domain.
   
 
  0.672
metH-2
COG1410 Methionine synthase I, cobalamin-binding domain.
   
 
  0.672
rplK
50S ribosomal protein L11.
   
   0.669
Your Current Organism:
Actinobacillus minor
NCBI taxonomy Id: 591023
Other names: A. minor 202, Actinobacillus minor 202, Actinobacillus minor str. 202, Actinobacillus minor strain 202
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.