STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AM202_0720Hypothetical protein. (414 aa)    
Predicted Functional Partners:
kdtA
3-deoxy-D-manno-octulosonic-acid transferase.
    
 0.907
AM202_0154
Putative glycosyltransferase family 2 protein.
  
 
 0.790
coaD
Phosphopantetheine adenylyltransferase.
  
    0.778
orn
Oligoribonuclease.
       0.773
EEV25311.1
COG0859 ADP-heptose:LPS heptosyltransferase.
 
 
 0.712
EEV24868.1
Hypothetical protein; COG0859 ADP-heptose:LPS heptosyltransferase.
 
 
 0.687
AM202_0158
Possible LPS sugar transferase.
 
  
 0.671
EEV24507.1
COG0515 Serine/threonine protein kinase.
 
  
  0.663
AM202_0724
Hypothetical protein.
       0.661
EEV24945.1
COG2350 Uncharacterized protein conserved in bacteria.
  
     0.650
Your Current Organism:
Actinobacillus minor
NCBI taxonomy Id: 591023
Other names: A. minor 202, Actinobacillus minor 202, Actinobacillus minor str. 202, Actinobacillus minor strain 202
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.