STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
amiBPutative N-acetylmuramoyl-L-alanine amidase AmiB precursor. (381 aa)    
Predicted Functional Partners:
guaA
Bifunctional GMP synthase/glutamine amidotransferase protein.
    
 0.895
AM202_0234
Hypothetical protein.
  
 0.857
lolA
Outer-membrane lipoprotein carrier protein precursor.
  
 
   0.828
AM202_0079
Putative lipoprotein.
  
 
 0.826
AM202_0802
Putative lipoprotein.
  
 
 0.826
EEV24611.1
Beta-hexosaminidase; COG1472 Beta-glucosidase-related glycosidases.
    
 0.825
AM202_0724
Hypothetical protein.
  
 
 0.813
EEV25032.1
N-acetyl-anhydromuranmyl-L-alanine amidase; COG3023 Negative regulator of beta-lactamase expression.
  
 
 0.810
AM202_0512
Putative membrane-bound metallopeptidase.
 
 
 0.756
guaB
Inositol-5-monophosphate dehydrogenase.
  
 
  0.735
Your Current Organism:
Actinobacillus minor
NCBI taxonomy Id: 591023
Other names: A. minor 202, Actinobacillus minor 202, Actinobacillus minor str. 202, Actinobacillus minor strain 202
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.