STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lgtFUDP-glucose--lipooligosaccharide glucosyltransferase. (253 aa)    
Predicted Functional Partners:
lpxK
Tetraacyldisaccharide 4'-kinase.
 
  
 0.678
waaQ
Heptosyltransferase.
 
  
 0.673
hldD
ADP-L-glycero-D-manno-heptose-6-epimerase.
 
 
 0.640
EEV25311.1
COG0859 ADP-heptose:LPS heptosyltransferase.
 
  
 0.581
potD2
Spermidine/putrescine-binding periplasmic protein 1 precursor.
       0.526
AM202_0154
Putative glycosyltransferase family 2 protein.
 
 
 0.464
EEV24867.1
Lipooligosaccharide D-glycero-D-manno-heptosyltransferase; COG0859 ADP-heptose:LPS heptosyltransferase.
  
    0.437
Your Current Organism:
Actinobacillus minor
NCBI taxonomy Id: 591023
Other names: A. minor 202, Actinobacillus minor 202, Actinobacillus minor str. 202, Actinobacillus minor strain 202
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.