STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lntApolipoprotein N-acyltransferase. (506 aa)    
Predicted Functional Partners:
corC
Magnesium and cobalt efflux protein CorC.
  
    0.728
EEV24865.1
PhoH-like protein; COG1702 Phosphate starvation-inducible protein PhoH, predicted ATPase.
   
 0.692
lolE
Outer membrane-specific lipoprotein transporter subunit LolE.
 
   
 0.555
EEV24681.1
Protective surface antigen D15 precursor; COG4775 Outer membrane protein/protective antigen OMA87.
  
   
 0.538
dps
Ferritin and DNA-binding stress protein.
       0.513
rpsA
COG0539 Ribosomal protein S1.
  
     0.512
EEV24619.1
COG1734 DnaK suppressor protein.
 
     0.506
AM202_0594
Putative lipoprotein.
  
   
 0.499
lolC
Lipoprotein-releasing system transmembrane protein lolC.
 
   
 0.483
EEV25222.1
COG0811 Biopolymer transport proteins.
  
   
 0.478
Your Current Organism:
Actinobacillus minor
NCBI taxonomy Id: 591023
Other names: A. minor 202, Actinobacillus minor 202, Actinobacillus minor str. 202, Actinobacillus minor strain 202
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.