STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lolAOuter-membrane lipoprotein carrier protein precursor. (220 aa)    
Predicted Functional Partners:
lolD
Lipoprotein-releasing system ATP-binding protein lolD.
   
 
 0.881
lolC
Lipoprotein-releasing system transmembrane protein lolC.
 
 
 
 0.868
AM202_0040
Putative macrolide-specific ABC-type efflux carrier.
   
 
 0.866
lolE
Outer membrane-specific lipoprotein transporter subunit LolE.
 
 
 
 0.858
amiB
Putative N-acetylmuramoyl-L-alanine amidase AmiB precursor.
  
 
   0.828
EEV25146.1
COG1452 Organic solvent tolerance protein OstA.
  
   
 0.727
trpR
Trp operon repressor.
       0.723
mtgA
Monofunctional biosynthetic peptidoglycan transglycosylase.
       0.705
smpA
Small protein A.
  
 
 
 0.661
lolB
COG3017 Outer membrane lipoprotein involved in outer membrane biogenesis.
  
 
 
 0.651
Your Current Organism:
Actinobacillus minor
NCBI taxonomy Id: 591023
Other names: A. minor 202, Actinobacillus minor 202, Actinobacillus minor str. 202, Actinobacillus minor strain 202
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.