STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
secGPreprotein translocase subunit SecG. (108 aa)    
Predicted Functional Partners:
secE
Preprotein translocase subunit SecE.
  
 0.992
secY
Preprotein translocase secY subunit.
  
 0.986
secA
Protein translocase subunit secA.
   
 0.967
oxaA
Inner membrane protein OxaA.
  
 0.965
secD
Preprotein translocase subunit SecD.
   
 0.946
EEV25111.1
COG1825 Ribosomal protein L25 (general stress protein Ctc).
 
   0.904
EEV25333.1
COG5295 Autotransporter adhesin.
   
 0.896
rplM
COG0102 Ribosomal protein L13.
  
   0.894
secF
Preprotein translocase subunit SecF.
   
 0.884
rplU
COG0261 Ribosomal protein L21.
  
   0.880
Your Current Organism:
Actinobacillus minor
NCBI taxonomy Id: 591023
Other names: A. minor 202, Actinobacillus minor 202, Actinobacillus minor str. 202, Actinobacillus minor strain 202
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.