STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mepAPenicillin-insensitive murein endopeptidase. (277 aa)    
Predicted Functional Partners:
EEV24201.1
Hypothetical protein; COG0730 Predicted permeases.
 
    0.773
EEV24790.1
COG3108 Uncharacterized protein conserved in bacteria.
  
     0.748
EEV25124.1
Hypothetical protein; COG3106 Predicted ATPase.
  
     0.610
topB2
DNA topoisomerase III.
       0.608
EEV24791.1
COG2989 Uncharacterized protein conserved in bacteria.
  
     0.598
AM202_0527
Hypothetical protein.
  
     0.583
AM202_106
Hypothetical symporter.
       0.518
AM202_0455
Putative ribonuclease.
  
     0.407
Your Current Organism:
Actinobacillus minor
NCBI taxonomy Id: 591023
Other names: A. minor 202, Actinobacillus minor 202, Actinobacillus minor str. 202, Actinobacillus minor strain 202
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.