Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EFK98084.1Lysine/ornithine decarboxylase; Belongs to the Orn/Lys/Arg decarboxylase class-II family. (396 aa)    
Predicted Functional Partners:
EFK98085.1
Conserved hypothetical protein.
 
 
   0.919
EFK98082.1
phytanoyl-CoA dioxygenase.
  
    0.889
EFK98083.1
Conserved hypothetical protein.
       0.888
EFK98086.1
Transmembrane transporter.
       0.888
EFL00231.1
Ornithine-oxo-acid transaminase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
 
  
 0.867
EFL03554.1
Arginase; Belongs to the arginase family.
  
 
 0.857
EFL03670.1
Putrescine aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
    
 0.850
EFK99402.1
Amidinotransferase.
     
  0.848
EFL00936.1
Spermidine synthase.
     
  0.848
EFL04021.1
orn/DAP/Arg decarboxylase 2.
  
  
  0.711
Your Current Organism:
Streptomyces sp. SPB78
NCBI taxonomy Id: 591157
Other names: S. sp. SPB78
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