Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EFK98279.1Phenylacetic acid degradation protein PaaA. (327 aa)    
Predicted Functional Partners:
EFK98280.1
Phenylacetic acid degradation protein PaaB.
 
 0.999
EFK98281.1
Phenylacetic acid degradation protein PaaC.
  
  0.995
EFK98282.1
phenylacetate-CoA oxygenase, PaaJ subunit.
 
 
 0.994
EFK98351.1
Phenylacetic acid degradation NADH oxidoreductase PaaE.
 
 0.988
EFK98274.1
Phenylacetic acid degradation protein PaaD.
 
 
 0.982
EFK98273.1
phenylacetate-CoA ligase; Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA).
 
 
 0.978
EFL02144.1
Ferredoxin.
 
 0.935
EFL02469.1
2-ketocyclohexanecarboxyl-CoA hydrolase; Unextendable partial coding region; Belongs to the enoyl-CoA hydratase/isomerase family.
 
 
  0.893
EFL02032.1
phenylacetyl-CoA ligase.
 
 
 0.846
EFK98275.1
Phenylacetic acid degradation protein paaN.
 
    0.837
Your Current Organism:
Streptomyces sp. SPB78
NCBI taxonomy Id: 591157
Other names: S. sp. SPB78
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