Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
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[Homology]
Score
EFK98284.1Peptide/opine/nickel uptake family ABC transporter. (618 aa)    
Predicted Functional Partners:
EFK98286.1
ABC transporter permease.
 
 0.996
EFL03954.1
Nickel ABC transporter, permease subunit NikB.
 
 0.989
EFL02945.1
Nickel ABC transporter, permease subunit NikB.
 
 0.984
EFK98540.1
Nickel ABC transporter, permease subunit NikB.
 
 0.982
EFK98122.1
Nickel ABC transporter, permease subunit NikB.
 
 0.981
EFL03140.1
Nickel ABC transporter, permease subunit NikB.
 
 0.979
EFL03730.1
Nickel ABC transporter, permease subunit NikB.
 
 0.979
EFL03684.1
Nickel ABC transporter, permease subunit NikB.
 
 0.978
EFL01346.1
Peptide ABC transporter permease.
 
 0.975
EFL02433.1
Nickel ABC transporter, permease subunit NikB.
 
 0.975
Your Current Organism:
Streptomyces sp. SPB78
NCBI taxonomy Id: 591157
Other names: S. sp. SPB78
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