Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
EFK98403.1Siderophore-interacting protein. (254 aa)    
Predicted Functional Partners:
EFL00079.1
Type II beta-Tyr adenylation domain-containing protein.
  
  
 0.654
EFK99863.1
Integral membrane protein.
 
     0.595
EFK98402.1
Conserved hypothetical protein.
       0.515
EFK98202.1
Mycodextranase.
  
    0.489
EFL00822.1
Amino acid adenylation; Belongs to the ATP-dependent AMP-binding enzyme family.
  
  
 0.467
EFK98404.1
Conserved hypothetical protein.
       0.456
EFK99332.1
Conserved hypothetical protein.
  
    0.440
EFK98913.1
Acetyltransferase.
  
     0.427
EFL03098.1
PlaZ.
  
     0.414
trpE
Anthranilate synthase component I; Part of a heterotetrameric complex that catalyzes the two- step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine-binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentr [...]
   
  
 0.411
Your Current Organism:
Streptomyces sp. SPB78
NCBI taxonomy Id: 591157
Other names: S. sp. SPB78
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