STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFK98419.1Conserved hypothetical protein. (185 aa)    
Predicted Functional Partners:
EFK99024.1
Conserved hypothetical protein.
  
     0.660
EFK99068.1
Conserved hypothetical protein.
  
     0.637
EFL01754.1
Alanine-rich protein.
  
     0.632
EFL02866.1
Conserved hypothetical protein.
  
     0.628
EFK98676.1
Secreted protein.
  
     0.595
EFL02626.1
Cell division protein FtsW; Belongs to the SEDS family.
       0.556
EFL04243.1
Regulatory protein.
  
     0.550
EFL00197.1
Conserved hypothetical protein.
  
     0.535
EFK99735.1
Membrane protein.
  
     0.532
EFK98467.1
Conserved hypothetical protein; Antitoxin component of a type II toxin-antitoxin (TA) system.
  
     0.529
Your Current Organism:
Streptomyces sp. SPB78
NCBI taxonomy Id: 591157
Other names: S. sp. SPB78
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.