Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EFK98471.1Regulatory protein. (171 aa)    
Predicted Functional Partners:
EFL02965.1
Two-component system sensor kinase.
    
 0.935
EFL01704.1
Regulatory protein.
  
     0.757
EFL02737.1
Regulatory protein.
  
     0.742
EFL01127.1
Predicted protein.
  
  
 0.724
EFL02076.1
Regulator protein containing histidine kinase domain-containing protein.
  
     0.720
EFL00647.1
Regulatory protein.
 
  
  0.709
EFL00417.1
Conserved hypothetical protein.
  
     0.708
EFL01212.1
Conserved hypothetical protein.
 
     0.687
EFL04186.1
Regulatory protein.
 
  
 0.665
EFL04136.1
Conserved hypothetical protein.
  
     0.661
Your Current Organism:
Streptomyces sp. SPB78
NCBI taxonomy Id: 591157
Other names: S. sp. SPB78
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