Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
EFK98476.1Lipolytic enzyme. (278 aa)    
Predicted Functional Partners:
EFK98477.1
Adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily.
       0.733
EFK98478.1
G/U mismatch-specific DNA glycosylase.
       0.698
EFK98472.1
Acetyltransferase.
       0.621
EFK98475.1
Integral membrane protein; Overlaps another CDS with the same product name.
       0.526
EFK98474.1
Integral membrane protein; Overlaps another CDS with the same product name.
       0.520
EFL02204.1
Integral membrane protein.
    
 0.496
EFK98557.1
Integral membrane protein.
  
     0.474
EFL01699.1
DNA polymerase I.
  
     0.453
EFL00978.1
Secreted esterase.
    
  0.415
EFL03399.1
Secreted protein.
    
  0.415
Your Current Organism:
Streptomyces sp. SPB78
NCBI taxonomy Id: 591157
Other names: S. sp. SPB78
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