STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFK98484.1Transcriptional regulatory protein. (384 aa)    
Predicted Functional Partners:
EFL00732.1
PTS system, sucrose-specific IIBC component.
  
 0.975
EFL02965.1
Two-component system sensor kinase.
    
 0.963
EFK98119.1
Regulatory protein.
  
  
  0.844
EFL00751.1
Transcriptional regulator.
  
     0.774
EFL02309.1
Transcriptional regulatory protein.
  
     0.774
EFK98325.1
Two-component system sensor kinase.
  
 0.740
EFL02709.1
Two-component system sensor kinase.
  
 0.740
EFL00934.1
Aldose 1-epimerase.
 
  
  0.533
EFL03735.1
Oxidoreductase family.
 
      0.532
EFL03419.1
Sugar kinase.
  
  
 
0.520
Your Current Organism:
Streptomyces sp. SPB78
NCBI taxonomy Id: 591157
Other names: S. sp. SPB78
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.