Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EFK98538.1D-methionine ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily. (586 aa)    
Predicted Functional Partners:
EFK98539.1
Nickel ABC transporter, permease subunit NikC.
 0.971
EFK98540.1
Nickel ABC transporter, permease subunit NikB.
 
 0.965
EFK98284.1
Peptide/opine/nickel uptake family ABC transporter.
 
0.935
EFL01345.1
Nickel ABC transporter, permease subunit NikC.
 0.919
EFL02944.1
Nickel ABC transporter, permease subunit NikC.
 0.916
EFL03303.1
Nickel ABC transporter, permease subunit NikC.
 0.913
EFL01346.1
Peptide ABC transporter permease.
 
 0.904
EFL03304.1
ABC transporter permease.
 
 0.904
EFK99444.1
Integral membrane protein.
  
 0.901
EFL00508.1
Cobalt ABC transporter, permease CbiQ.
  
 0.901
Your Current Organism:
Streptomyces sp. SPB78
NCBI taxonomy Id: 591157
Other names: S. sp. SPB78
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