Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-expression
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[Homology]
Score
EFK98553.1Iron sulfur protein. (143 aa)    
Predicted Functional Partners:
EFK99262.1
Ferredoxin reductase.
  
 0.865
EFK99171.1
Glutamate synthase(NADPH) large subunit.
   
 
 0.779
EFK98008.1
Ferredoxin reductase.
  
 
 0.765
EFL00020.1
Ferredoxin reductase.
  
 
 0.765
EFL04271.1
Ferredoxin reductase.
  
 
 0.765
EFK99273.1
Conserved hypothetical protein.
  
 
  0.702
EFK98726.1
Precorrin-4 C11-methyltransferase; Belongs to the precorrin methyltransferase family.
  
  
 0.677
EFL02144.1
Ferredoxin.
  
 
 0.671
EFL01785.1
uroporphyrin-III C-methyltransferase/uroporphyrinogen-III synthase.
  
  
 0.658
EFK98351.1
Phenylacetic acid degradation NADH oxidoreductase PaaE.
  
 
 0.653
Your Current Organism:
Streptomyces sp. SPB78
NCBI taxonomy Id: 591157
Other names: S. sp. SPB78
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