Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-expression
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[Homology]
Score
EFK98690.1Integral membrane protein. (216 aa)    
Predicted Functional Partners:
EFK98689.1
Recombination factor protein RarA.
       0.784
hisS
histidyl-tRNA synthetase.
       0.704
EFK98692.1
Hydrolase.
       0.701
EFK98693.1
Peptidyl-prolyl cis-trans isomerase.
       0.650
EFK98694.1
ATPase.
       0.615
rpsD
Ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit.
 
     0.584
EFK98688.1
Cyclase/dehydrase.
       0.561
EFL03073.1
K+ transport system.
  
     0.544
EFK98721.1
DSBA oxidoreductase.
 
  
 0.528
EFL04202.1
Tyrosinase.
       0.515
Your Current Organism:
Streptomyces sp. SPB78
NCBI taxonomy Id: 591157
Other names: S. sp. SPB78
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