STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFK98817.1Secreted peptidyl-prolyl cis-trans isomerase. (331 aa)    
Predicted Functional Partners:
EFK99350.1
Predicted protein.
   
 0.954
EFL02840.1
Heat shock protein.
   
 0.954
EFK97982.1
Calcium binding protein.
   
 
 0.935
EFK99812.1
Calcium binding protein.
   
 
 0.935
dnaK
Chaperone DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
   
 0.902
EFK98573.1
DNA polymerase IV.
    
   0.843
EFK98922.1
DNA-directed DNA polymerase.
    
   0.843
EFL00891.1
Aspartate kinase, monofunctional class; Belongs to the aspartokinase family.
    
   0.819
infA
Translation initiation factor IF-1; One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre-initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initiation complex.
   
   0.818
EFK98816.1
Peptidyl-prolyl cis-trans isomerase.
 
    
0.795
Your Current Organism:
Streptomyces sp. SPB78
NCBI taxonomy Id: 591157
Other names: S. sp. SPB78
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.