Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EFK98864.1Cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase. (278 aa)    
Predicted Functional Partners:
EFL00079.1
Type II beta-Tyr adenylation domain-containing protein.
  
 0.956
EFL00822.1
Amino acid adenylation; Belongs to the ATP-dependent AMP-binding enzyme family.
  
 0.910
aroA
PlmJK; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate.
 
 
  0.891
EFL03359.1
Amino acid adenylation.
  
 0.886
EFL03360.1
Virginiamycin S synthetase.
  
 0.886
EFK99518.1
3-oxoacyl-[acyl-carrier-protein] synthase 2; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP.
   
  0.868
EFL03352.1
Peptide synthetase.
  
 0.858
EFL03358.1
Pristinamycin I synthase 3 and 4.
  
 0.858
EFL03763.1
Beta keto-acyl synthase; Truncated CDS.
  
 0.858
EFK98863.1
acyl-CoA dehydrogenase domain-containing protein.
 
  0.852
Your Current Organism:
Streptomyces sp. SPB78
NCBI taxonomy Id: 591157
Other names: S. sp. SPB78
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